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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913198.1_cds_XP_016463254.1_56391
CDS Infomation

[gene=LOC107786308] [db_xref=GeneID:107786308] [protein=shikimate O-hydroxycinnamoyltransferase-like] [protein_id=XP_016463254.1] [location=join(4240..4677,5505..6476)] [gbkey=CDS]
Sequence

ATGTGTATAAACGAGATAACTACAAAAAGAAACTTCATTGTGAAGATGAGCAAGACTGAA
GTTGTGGCAGCAGTTTTGCCAATACAAGAGCATTGGCTACCACTGTCCAATCTTGACTTG
CTCTTGCCTCCATTGGATGTTGGAGTTATCTTCTGTTATCAAAATCCTATTTCAGTGACA
ACAACATTAGAATTTGGTTCAATGATCAAAATTCTTAAAGCTTCTTTGGCTGAAACATTA
GTTTCTTACTATGCATTTGCTGGAGAGATAGTTCAAAACTTAGCTGGAGAACCTGAGGTT
CTTTGCAACAATAGTGGAGTCAATTTTACAGAAGCTTTTGCTGATGTTGAGCTCAAAGAA
ATCAACTTTTATGATCCAGATGAGAGTATAGAGGGAAAACTTGTTCCAAAGAAGAAGTAT
GGTGTACTAGCTGTTCAGGTTACACAACTCACATGCGGAGGAATAGTAGTGGGTTGCACA
TTTGATCATCGAGTTGCTGATGCATATTCAGCCAACTTGTTTCTTGTATCATGGTCTGAA
TTAGCTCAATCCAAACCACTCACTCAGCTCCCATCTTTCCGTCGATCGTTCCTTTTTCCT
CGACGTCCTGGTTACTACGATAACTCAATCGATGGCTTGTACGTACCAATAACAACCCTA
CCACCCTCAATACCCGAAACCTTGAACACTAACGATCAAGCTATAAGTAGAATTTACTAT
GTCACGGGGGAGAAAATTAGCCACCTTCAATCACTAGCCAATAGTGACCAAAAAAGCACG
AAATTCCATAGGTCTAAACTTGAATCATTCAGTGCTTTCCTGTGGAAAACTATTGCATGT
GGAATTAAAGAAACATCAAATTCCAAGAATTTCAGGTTTGGTATCGTTGTTGATGGTAGG
ACTCGATTGAGTAACGGAGATGATAATCAAGAAAAATCACTAAAAGGGTATTTTGGCAAC
GTTCTCTCCATCCCATTTGGAAACAAGAAAATTGAGGAGCTAAAAGAGAAGCCATTGAGT
TGGGTGGCAAATGCAATTCATGAGTTTATAGAAAAAGCAGTAACACGCGAACATTTTCTT
GGATTGATAGATTGGGTTGAGGCCCATCGCCCTGAGCCAGCTGTGGCAAAAATATACGCC
ACAGATGATGATGGGCCCGCCGTGGTAGTATCATCAGGGCAACAATTTCCAGCCAGAGAG
ATAAATTTCGGATGGGGTGAGCCAGTCTTCTGGTCGTACCATTTTCCATGGGCGGGAAAA
TCAGGATATGTGATGCCAGTGCCAAGTCCTACAGGAAATGGAGATTGGATTATTTATATG
CATTTAATGAAATGGCAATTGGAACTAATTGAGGCTTCTGCATCCCATGTGTTCGAGCCT
CTGACTGCAAATTATCTCAACTTGATTTAA

Peptide Sequence

PEP ID

XP_016463254.1
PEP Infomation

PREDICTED: shikimate O-hydroxycinnamoyltransferase-like [Nicotiana tabacum]
Sequence

MCINEITTKRNFIVKMSKTEVVAAVLPIQEHWLPLSNLDLLLPPLDVGVIFCYQNPISVT
TTLEFGSMIKILKASLAETLVSYYAFAGEIVQNLAGEPEVLCNNSGVNFTEAFADVELKE
INFYDPDESIEGKLVPKKKYGVLAVQVTQLTCGGIVVGCTFDHRVADAYSANLFLVSWSE
LAQSKPLTQLPSFRRSFLFPRRPGYYDNSIDGLYVPITTLPPSIPETLNTNDQAISRIYY
VTGEKISHLQSLANSDQKSTKFHRSKLESFSAFLWKTIACGIKETSNSKNFRFGIVVDGR
TRLSNGDDNQEKSLKGYFGNVLSIPFGNKKIEELKEKPLSWVANAIHEFIEKAVTREHFL
GLIDWVEAHRPEPAVAKIYATDDDGPAVVVSSGQQFPAREINFGWGEPVFWSYHFPWAGK
SGYVMPVPSPTGNGDWIIYMHLMKWQLELIEASASHVFEPLTANYLNLI

Transcript Sequence

Gene sequence data has not been registered.